Data for regulatory documentation

This page has been reviewed and verified by Thomas Kofoed, PhD in Organic Chemistry
Regulatory requirements aim to ensure patient safety and efficacy of the pharmaceuticals. Maintaining compliance with increasingly complex regulatory requirements without unduly impacting production costs or time-to-market is one of the biggest challenges for biopharmaceutical companies.
Protein analysis by Mass spectrometry (LC-MS), produced to fulfill ICH guidelines, enables you to document the robustness of your downstream process, provides detailed information about critical quality attributes and host cell impurities, and shows batch-to-batch comparability. The analysis can even be validated according to ICH guidelines under GMP for use as product release testing.
Alphalyse HCP analyses comply with the upcoming U.S. Pharmacopeia general chapter 1132.1 on best practices for protein impurity identification and quantitation using LC-MS, including the USP's intact protein standards to support the identification and quantification of high-risk and high-abundance protein impurities.

Which data can Alphalyse provide for regulatory documentation?
Robust, reproducible data for process validation and risk assessment
Process and product characterization for documentation in accordance with regulatory guidelines
Chemistry, manufacturing, and control (CMC) information
Detailed data on drug substance identity, purity, and quality for CTD, IND, NDA, and BLA submissions
HCP analysis under GMP for release test and clinical trial documentation
Quality control of biological API using analysis under GMP conditions – for use as release assay for Phase III and market
Typical project process
You typically work with
these experts:



Project scope
We like to start with an online meeting to learn more about your project. Based on your needs, you will receive a draft proposal outlining the suggested analyses and expected timeframe.
Samples
After signing the final project proposal, we will contact you for details about your samples. We will inform you of an estimated report delivery date as soon as we receive your samples.
Execution
A project leader will oversee the project and send you status updates by email at regular intervals.
A typical project includes:
- Analysis of at least three batches and relevant process samples by LC-MS to identify the HCPs across batches.
- Selection of signature peptides for assay set-up.
- Optimized sample preparation explicitly for your samples.
- Spike-in of internal standard proteins (0-2000 ppm), enabling quantification linearity typically to low ppm levels.
- Design of validation protocol according to ICH Q2 guidelines.
- Execution of the validation experiments.
Results
You will receive the report by email, the analysis report includes:
- Objectives, description of analytical procedure, results, and conclusions.
- Selected raw data, e.g., excel sheets. You may request additional raw data if needed.
Follow up
We invite your team to review the results at an online meeting upon project completion.
Curious to know more?

Whatever challenge or question you may have, we are here to help you solve it. One of our protein analysis experts will discuss the best analysis approach or method for your project by email or online meeting – without obligation.
Client stories
Lot-to-lot consistency and Host Cell Protein impurity profiling of an adenovirus-encoded vaccine using LC-MS
Open Access article: Comparison of USP 1132.1 quantitation methods
Article: Regulatory Consequences of New Protein-Impurity Guidelines
Article: Is mass spectrometry the future of impurity analysis?
PDF: The Alphalyse Approach
Identifying a polysorbate-degrading lipase in mAbs
World’s first GMP-validated MS-based residual enzyme analysis
Troubleshooting HCP ELISA results using LC-MS and ELISA-MS™
Characterization of a mock sample before ELISA development
Selecting the best HCP-ELISA kit out of five
PDF: Standard HCP assay validation protocol
Webinar: #Rethink your HCP strategy
FDA approves IND using LC-MS-based Host Cell Protein assay
HCP-ELISA coverage analysis without a null cell line
Quantifying lentivirus and residual proteins in one assay
Benefits of LC-MS data for regulatory documentation
Suitable for providing data packages to the FDA, MHRA, and EMA.
A process- and product-specific assay can be developed within weeks. 'Furthermore, it is possible to validate the assay for release testing.
It can easily be adjusted to changes in your process or production.
Avoid project delays due to regulatory authorities' request for orthogonal HCP characterization (MS-data).
What clients say
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Talk to us
Whatever protein-related challenge or question you may have, we would love to help. Our experts can help you decide on the best analytical approach for your project by email or online meeting - providing advice without obligation.









